Computer methods, part C - Johnson, Michael L.; Brand, Ludwig (Amsterdam Elsevier/Academic Press, 2011)
1. Predicting fluorescence lifetimes and spectra of biopolymers / Patrik R. Callis -- 2. Modeling of regulatory networks : theory and applications in the study of the Drosophila circadian clock / Elizabeth Y. Scribner and Hassan M. Fathallah-Shaykh -- 3. Strategies for articulated multibody-based adaptive coarse grain simulation of RNA / Mohammad Poursina, Kishor D. Bhalerao, Samuel C. Flores, Kurt S. Anderson, and Alain Laederach -- 4. Modeliing loop entropy / Gregory S. Chirikjian -- 5. Inferring functional relationships and causal network structure from gene expression profiles / Radhakrishnan Nagarajan and Meenakshi Upreti -- 6. Numerical solution of the chemical master equation : uniqueness and stability of the stationary distribution for chemical networks, and mRNA bursting in a gene network with negative feedback regulation / E.S. Zeron and M. Santillán -- 7. How molecular should your molecular model be? / Didier Gonze, Wassim Abou-Jaoudé, Djomangan Adama Ouattara, and José Halloy -- 8. Computational modeling of biological pathways by executable biology / Maria Luisa Guerriero and John K. Heath -- 9. Computing molecular fluctuations in biochemical reaction systems based on a mechanistic, statistical theory of irreversible processes / Don Kulasiri -- 10. Probing the input-output behavior of biochemical and genetic systems : system idenitification methods from control theory / Jordan Ang, Brian Ingalls, and David McMillen -- 11. Biochemical pathway modeling tools for drug target detection in cancer and other complex diseases / Alberto Marin-Sanguino, Shailendra K. Gupta, Eberhard O. Voit, and Julio Vera -- 12. Deterministic and stochastic simulation and analysis of biochemical reaction networks : the lactose operon example / Necmettin Yildirim and Caner Kazanci -- 13. Multivariate neighborhood sample entropy : a method for data reduction and prediction of complex data / Joshua S. Richman -- 14. Scaling differences of heartbeat excursions between wake and sleep periods / L. Guzmán-Vargas, I. Reyes Ramírez, R. Hernández-Pérez, and F. Angulo-Brown -- 15. Changepoint analysis for single-molecule polarized total internal reflection fuorescence microscopy experiments / John F. Beausang, Yale E. Goldman, and Philip C. Nelson -- 16. Inferring mechanisms from dose-response curves / Carson C. Chow, Karen M. Ong, Edward J. Dougherty, and S. Stoney Simons Jr. -- 17. Spatial aspects in biological system simulations / Haluk Resat, Michelle N. Costa, and Harish Shankaran -- 18. Computational approaches to modeling viral structure and assembly / Stephen C. Harvey, Anton S. Petrov, Batsal Devkota, and Mustafa Burak Boz -- 19. Rosetta3 : an object-oriented software suite for the simulation and design of macromolecules / Andrew Leaver-Fay, Michael Tyka, Steven M. Lewis [et al.] -- 20. Computational design of intermolecular stability and specificity in protein self-assembly / Vikas Nanda, Sohail Zahid, Fei Xu, and Daniel Levine -- 21. Differential analysis of 2D gel images / Feng Li and Franc̜oise Seillier-Moiseiwitsch
Includes bibliographical references and indexes.
Keywords: Biomedical engineering -- Computer simulation; Electronic books